TY - JOUR AU - Fuchs, Y. AU - Steller, H. PY - 2011 DA - 2011// TI - Programmed cell death in animal development and disease JO - Cell VL - 147 UR - https://doi.org/10.1016/j.cell.2011.10.033 DO - 10.1016/j.cell.2011.10.033 ID - Fuchs2011 ER - TY - JOUR AU - Clarke, P. G. PY - 1990 DA - 1990// TI - Developmental cell death: morphological diversity and multiple mechanisms JO - Anat Embryol VL - 181 UR - https://doi.org/10.1007/BF00174615 DO - 10.1007/BF00174615 ID - Clarke1990 ER - TY - JOUR AU - Kerr, J. F. AU - Wyllie, A. H. AU - Currie, A. R. PY - 1972 DA - 1972// TI - Apoptosis: a basic biological phenomenon with wide-ranging implications in tissue kinetics JO - Br J Cancer VL - 26 UR - https://doi.org/10.1038/bjc.1972.33 DO - 10.1038/bjc.1972.33 ID - Kerr1972 ER - TY - JOUR AU - Shintani, T. AU - Klionsky, D. J. PY - 2004 DA - 2004// TI - Autophagy in health and disease: a double-edged sword JO - Science VL - 306 UR - https://doi.org/10.1126/science.1099993 DO - 10.1126/science.1099993 ID - Shintani2004 ER - TY - JOUR AU - Wang, C. W. AU - Klionsky, D. J. PY - 2003 DA - 2003// TI - The molecular mechanism of autophagy JO - Mol Med VL - 9 ID - Wang2003 ER - TY - JOUR AU - Lockshin, R. A. AU - Zakeri, Z. PY - 2001 DA - 2001// TI - Programmed cell death and apoptosis: origins of the theory JO - Nat Rev Mol Cell Biol VL - 2 UR - https://doi.org/10.1038/35080097 DO - 10.1038/35080097 ID - Lockshin2001 ER - TY - JOUR AU - Cuervo, A. M. PY - 2004 DA - 2004// TI - Autophagy: in sickness and in health JO - Trends Cell Biol VL - 14 UR - https://doi.org/10.1016/j.tcb.2003.12.002 DO - 10.1016/j.tcb.2003.12.002 ID - Cuervo2004 ER - TY - JOUR AU - Mizushima, N. AU - Komatsu, M. PY - 2011 DA - 2011// TI - Autophagy: renovation of cells and tissues JO - Cell VL - 147 UR - https://doi.org/10.1016/j.cell.2011.10.026 DO - 10.1016/j.cell.2011.10.026 ID - Mizushima2011 ER - TY - JOUR AU - Berry, D. L. AU - Baehrecke, E. H. PY - 2007 DA - 2007// TI - Growth arrest and autophagy are required for salivary gland cell degradation in Drosophila JO - Cell VL - 131 UR - https://doi.org/10.1016/j.cell.2007.10.048 DO - 10.1016/j.cell.2007.10.048 ID - Berry2007 ER - TY - JOUR AU - Batlevi, Y. AU - Martin, D. N. AU - Pandey, U. B. AU - Simon, C. R. AU - Powers, C. M. AU - Taylor, J. P. PY - 2010 DA - 2010// TI - Dynein light chain 1 is required for autophagy, protein clearance, and cell death in Drosophila JO - Proc Natl Acad Sci U S A VL - 107 UR - https://doi.org/10.1073/pnas.0907967107 DO - 10.1073/pnas.0907967107 ID - Batlevi2010 ER - TY - JOUR AU - Wen, Y. D. AU - Sheng, R. AU - Zhang, L. S. AU - Han, R. AU - Zhang, X. AU - Zhang, X. D. PY - 2008 DA - 2008// TI - Neuronal injury in rat model of permanent focal cerebral ischemia is associated with activation of autophagic and lysosomal pathways JO - Autophagy VL - 4 UR - https://doi.org/10.4161/auto.6412 DO - 10.4161/auto.6412 ID - Wen2008 ER - TY - JOUR AU - Zhu, J. H. AU - Horbinski, C. AU - Guo, F. AU - Watkins, S. AU - Uchiyama, Y. AU - Chu, C. T. PY - 2007 DA - 2007// TI - Regulation of autophagy by extracellular signal-regulated protein kinases during 1-methyl-4-phenylpyridinium-induced cell death JO - Am J Pathol VL - 170 UR - https://doi.org/10.2353/ajpath.2007.060524 DO - 10.2353/ajpath.2007.060524 ID - Zhu2007 ER - TY - JOUR AU - Yu, S. W. AU - Baek, S. H. AU - Brennan, R. T. AU - Bradley, C. J. AU - Park, S. K. AU - Lee, Y. S. PY - 2008 DA - 2008// TI - Autophagic death of adult hippocampal neural stem cells following insulin withdrawal JO - Stem Cells VL - 26 UR - https://doi.org/10.1634/stemcells.2008-0153 DO - 10.1634/stemcells.2008-0153 ID - Yu2008 ER - TY - JOUR AU - Chung, K. M. AU - Park, H. AU - Jung, S. AU - Ha, S. AU - Yoo, S. J. AU - Woo, H. PY - 2015 DA - 2015// TI - Calpain Determines the Propensity of Adult Hippocampal Neural Stem Cells to Autophagic Cell Death Following Insulin Withdrawal JO - Stem Cells ID - Chung2015 ER - TY - JOUR AU - Ha, S. AU - Ryu, H. Y. AU - Chung, K. M. AU - Baek, S. H. AU - Kim, E. K. AU - Yu, S. W. PY - 2015 DA - 2015// TI - Regulation of autophagic cell death by glycogen synthase kinase-3beta in adult hippocampal neural stem cells following insulin withdrawal JO - Mol Brain VL - 8 UR - https://doi.org/10.1186/s13041-015-0119-9 DO - 10.1186/s13041-015-0119-9 ID - Ha2015 ER - TY - JOUR AU - Shen, H. M. AU - Codogno, P. PY - 2011 DA - 2011// TI - Autophagic cell death: Loch Ness monster or endangered species? JO - Autophagy VL - 7 UR - https://doi.org/10.4161/auto.7.5.14226 DO - 10.4161/auto.7.5.14226 ID - Shen2011 ER - TY - JOUR AU - Meyer, H. AU - Bug, M. AU - Bremer, S. PY - 2012 DA - 2012// TI - Emerging functions of the VCP/p97 AAA-ATPase in the ubiquitin system JO - Nat Cell Biol VL - 14 UR - https://doi.org/10.1038/ncb2407 DO - 10.1038/ncb2407 ID - Meyer2012 ER - TY - JOUR AU - Pye, V. E. AU - Dreveny, I. AU - Briggs, L. C. AU - Sands, C. AU - Beuron, F. AU - Zhang, X. PY - 2006 DA - 2006// TI - Going through the motions: the ATPase cycle of p97 JO - J Struct Biol VL - 156 UR - https://doi.org/10.1016/j.jsb.2006.03.003 DO - 10.1016/j.jsb.2006.03.003 ID - Pye2006 ER - TY - JOUR AU - DeLaBarre, B. AU - Brunger, A. T. PY - 2005 DA - 2005// TI - Nucleotide dependent motion and mechanism of action of p97/VCP JO - J Mol Biol VL - 347 UR - https://doi.org/10.1016/j.jmb.2005.01.060 DO - 10.1016/j.jmb.2005.01.060 ID - DeLaBarre2005 ER - TY - JOUR AU - Schuberth, C. AU - Buchberger, A. PY - 2008 DA - 2008// TI - UBX domain proteins: major regulators of the AAA ATPase Cdc48/p97 JO - Cell Mol Life Sci VL - 65 UR - https://doi.org/10.1007/s00018-008-8072-8 DO - 10.1007/s00018-008-8072-8 ID - Schuberth2008 ER - TY - JOUR AU - Yeung, H. O. AU - Kloppsteck, P. AU - Niwa, H. AU - Isaacson, R. L. AU - Matthews, S. AU - Zhang, X. PY - 2008 DA - 2008// TI - Insights into adaptor binding to the AAA protein p97 JO - Biochem Soc Trans VL - 36 UR - https://doi.org/10.1042/BST0360062 DO - 10.1042/BST0360062 ID - Yeung2008 ER - TY - JOUR AU - Kondo, H. AU - Rabouille, C. AU - Newman, R. AU - Levine, T. P. AU - Pappin, D. AU - Freemont, P. PY - 1997 DA - 1997// TI - p47 is a cofactor for p97-mediated membrane fusion JO - Nature VL - 388 UR - https://doi.org/10.1038/40411 DO - 10.1038/40411 ID - Kondo1997 ER - TY - JOUR AU - Meyer, H. H. AU - Shorter, J. G. AU - Seemann, J. AU - Pappin, D. AU - Warren, G. PY - 2000 DA - 2000// TI - A complex of mammalian ufd1 and npl4 links the AAA-ATPase, p97, to ubiquitin and nuclear transport pathways JO - EMBO J VL - 19 UR - https://doi.org/10.1093/emboj/19.10.2181 DO - 10.1093/emboj/19.10.2181 ID - Meyer2000 ER - TY - JOUR AU - Wang, Y. AU - Satoh, A. AU - Warren, G. AU - Meyer, H. H. PY - 2004 DA - 2004// TI - VCIP135 acts as a deubiquitinating enzyme during p97-p47-mediated reassembly of mitotic Golgi fragments JO - J Cell Biol VL - 164 UR - https://doi.org/10.1083/jcb.200401010 DO - 10.1083/jcb.200401010 ID - Wang2004 ER - TY - JOUR AU - Schuberth, C. AU - Buchberger, A. PY - 2005 DA - 2005// TI - Membrane-bound Ubx2 recruits Cdc48 to ubiquitin ligases and their substrates to ensure efficient ER-associated protein degradation JO - Nat Cell Biol VL - 7 UR - https://doi.org/10.1038/ncb1299 DO - 10.1038/ncb1299 ID - Schuberth2005 ER - TY - JOUR AU - Stolz, A. AU - Hilt, W. AU - Buchberger, A. AU - Wolf, D. H. PY - 2011 DA - 2011// TI - Cdc48: a power machine in protein degradation JO - Trends Biochem Sci VL - 36 UR - https://doi.org/10.1016/j.tibs.2011.06.001 DO - 10.1016/j.tibs.2011.06.001 ID - Stolz2011 ER - TY - JOUR AU - Ju, J. S. AU - Fuentealba, R. A. AU - Miller, S. E. AU - Jackson, E. AU - Piwnica-Worms, D. AU - Baloh, R. H. PY - 2009 DA - 2009// TI - Valosin-containing protein (VCP) is required for autophagy and is disrupted in VCP disease JO - J Cell Biol VL - 187 UR - https://doi.org/10.1083/jcb.200908115 DO - 10.1083/jcb.200908115 ID - Ju2009 ER - TY - JOUR AU - Tresse, E. AU - Salomons, F. A. AU - Vesa, J. AU - Bott, L. C. AU - Kimonis, V. AU - Yao, T. P. PY - 2010 DA - 2010// TI - VCP/p97 is essential for maturation of ubiquitin-containing autophagosomes and this function is impaired by mutations that cause IBMPFD JO - Autophagy VL - 6 UR - https://doi.org/10.4161/auto.6.2.11014 DO - 10.4161/auto.6.2.11014 ID - Tresse2010 ER - TY - JOUR AU - Seguin, S. J. AU - Morelli, F. F. AU - Vinet, J. AU - Amore, D. AU - Biasi, S. AU - Poletti, A. PY - 2014 DA - 2014// TI - Inhibition of autophagy, lysosome and VCP function impairs stress granule assembly JO - Cell Death Differ VL - 21 UR - https://doi.org/10.1038/cdd.2014.103 DO - 10.1038/cdd.2014.103 ID - Seguin2014 ER - TY - JOUR AU - Watts, G. D. AU - Wymer, J. AU - Kovach, M. J. AU - Mehta, S. G. AU - Mumm, S. AU - Darvish, D. PY - 2004 DA - 2004// TI - Inclusion body myopathy associated with Paget disease of bone and frontotemporal dementia is caused by mutant valosin-containing protein JO - Nat Genet VL - 36 UR - https://doi.org/10.1038/ng1332 DO - 10.1038/ng1332 ID - Watts2004 ER - TY - JOUR AU - Braun, R. J. AU - Zischka, H. PY - 2008 DA - 2008// TI - Mechanisms of Cdc48/VCP-mediated cell death: from yeast apoptosis to human disease JO - Biochim Biophys Acta VL - 1783 UR - https://doi.org/10.1016/j.bbamcr.2008.01.015 DO - 10.1016/j.bbamcr.2008.01.015 ID - Braun2008 ER - TY - JOUR AU - Liu, Y. AU - Namba, T. AU - Liu, J. AU - Suzuki, R. AU - Shioda, S. AU - Seki, T. PY - 2010 DA - 2010// TI - Glial fibrillary acidic protein-expressing neural progenitors give rise to immature neurons via early intermediate progenitors expressing both glial fibrillary acidic protein and neuronal markers in the adult hippocampus JO - Neuroscience VL - 166 UR - https://doi.org/10.1016/j.neuroscience.2009.12.026 DO - 10.1016/j.neuroscience.2009.12.026 ID - Liu2010 ER - TY - JOUR AU - Bloom, G. S. AU - Vallee, R. B. PY - 1983 DA - 1983// TI - Association of microtubule-associated protein 2 (MAP 2) with microtubules and intermediate filaments in cultured brain cells JO - J Cell Biol VL - 96 UR - https://doi.org/10.1083/jcb.96.6.1523 DO - 10.1083/jcb.96.6.1523 ID - Bloom1983 ER - TY - JOUR AU - Kabeya, Y. AU - Mizushima, N. AU - Ueno, T. AU - Yamamoto, A. AU - Kirisako, T. AU - Noda, T. PY - 2000 DA - 2000// TI - LC3, a mammalian homologue of yeast Apg8p, is localized in autophagosome membranes after processing JO - EMBO J VL - 19 UR - https://doi.org/10.1093/emboj/19.21.5720 DO - 10.1093/emboj/19.21.5720 ID - Kabeya2000 ER - TY - JOUR AU - Mizushima, N. AU - Yoshimori, T. PY - 2007 DA - 2007// TI - How to interpret LC3 immunoblotting JO - Autophagy VL - 3 UR - https://doi.org/10.4161/auto.4600 DO - 10.4161/auto.4600 ID - Mizushima2007 ER - TY - JOUR AU - Jiang, P. AU - Mizushima, N. PY - 2015 DA - 2015// TI - LC3- and p62-based biochemical methods for the analysis of autophagy progression in mammalian cells JO - Methods VL - 75 UR - https://doi.org/10.1016/j.ymeth.2014.11.021 DO - 10.1016/j.ymeth.2014.11.021 ID - Jiang2015 ER - TY - JOUR AU - Kim, M. AU - Habiba, A. AU - Doherty, J. M. AU - Mills, J. C. AU - Mercer, R. W. AU - Huettner, J. E. PY - 2009 DA - 2009// TI - Regulation of mouse embryonic stem cell neural differentiation by retinoic acid JO - Dev Biol VL - 328 UR - https://doi.org/10.1016/j.ydbio.2009.02.001 DO - 10.1016/j.ydbio.2009.02.001 ID - Kim2009 ER - TY - JOUR AU - Foret, M. R. AU - Sandstrom, R. S. AU - Rhodes, C. T. AU - Wang, Y. AU - Berger, M. S. AU - Lin, C. H. PY - 2014 DA - 2014// TI - Molecular targets of chromatin repressive mark H3K9me3 in primate progenitor cells within adult neurogenic niches JO - Front Genet VL - 5 UR - https://doi.org/10.3389/fgene.2014.00252 DO - 10.3389/fgene.2014.00252 ID - Foret2014 ER - TY - JOUR AU - Klionsky, D. J. AU - Elazar, Z. AU - Seglen, P. O. AU - Rubinsztein, D. C. PY - 2008 DA - 2008// TI - Does bafilomycin A1 block the fusion of autophagosomes with lysosomes? JO - Autophagy VL - 4 UR - https://doi.org/10.4161/auto.6845 DO - 10.4161/auto.6845 ID - Klionsky2008 ER - TY - JOUR AU - Chou, T. F. AU - Brown, S. J. AU - Minond, D. AU - Nordin, B. E. AU - Li, K. AU - Jones, A. C. PY - 2011 DA - 2011// TI - Reversible inhibitor of p97, DBeQ, impairs both ubiquitin-dependent and autophagic protein clearance pathways JO - Proc Natl Acad Sci U S A VL - 108 UR - https://doi.org/10.1073/pnas.1015312108 DO - 10.1073/pnas.1015312108 ID - Chou2011 ER - TY - JOUR AU - Degterev, A. AU - Hitomi, J. AU - Germscheid, M. AU - Ch’en, I. L. AU - Korkina, O. AU - Teng, X. PY - 2008 DA - 2008// TI - Identification of RIP1 kinase as a specific cellular target of necrostatins JO - Nat Chem Biol VL - 4 UR - https://doi.org/10.1038/nchembio.83 DO - 10.1038/nchembio.83 ID - Degterev2008 ER - TY - JOUR AU - Noguchi, M. AU - Takata, T. AU - Kimura, Y. AU - Manno, A. AU - Murakami, K. AU - Koike, M. PY - 2005 DA - 2005// TI - ATPase activity of p97/valosin-containing protein is regulated by oxidative modification of the evolutionally conserved cysteine 522 residue in Walker A motif JO - J Biol Chem VL - 280 UR - https://doi.org/10.1074/jbc.M509700200 DO - 10.1074/jbc.M509700200 ID - Noguchi2005 ER - TY - JOUR AU - Wojcik, C. AU - Yano, M. AU - DeMartino, G. N. PY - 2004 DA - 2004// TI - RNA interference of valosin-containing protein (VCP/p97) reveals multiple cellular roles linked to ubiquitin/proteasome-dependent proteolysis JO - J Cell Sci VL - 117 UR - https://doi.org/10.1242/jcs.00841 DO - 10.1242/jcs.00841 ID - Wojcik2004 ER - TY - JOUR AU - Rao, R. V. AU - Castro-Obregon, S. AU - Frankowski, H. AU - Schuler, M. AU - Stoka, V. AU - Rio, G. PY - 2002 DA - 2002// TI - Coupling endoplasmic reticulum stress to the cell death program. An Apaf-1-independent intrinsic pathway JO - J Biol Chem VL - 277 UR - https://doi.org/10.1074/jbc.M202726200 DO - 10.1074/jbc.M202726200 ID - Rao2002 ER - TY - JOUR AU - Rao, R. V. AU - Ellerby, H. M. AU - Bredesen, D. E. PY - 2004 DA - 2004// TI - Coupling endoplasmic reticulum stress to the cell death program JO - Cell Death Differ VL - 11 UR - https://doi.org/10.1038/sj.cdd.4401378 DO - 10.1038/sj.cdd.4401378 ID - Rao2004 ER - TY - JOUR AU - Vij, N. AU - Fang, S. AU - Zeitlin, P. L. PY - 2006 DA - 2006// TI - Selective inhibition of endoplasmic reticulum-associated degradation rescues DeltaF508-cystic fibrosis transmembrane regulator and suppresses interleukin-8 levels: therapeutic implications JO - J Biol Chem VL - 281 UR - https://doi.org/10.1074/jbc.M600509200 DO - 10.1074/jbc.M600509200 ID - Vij2006 ER - TY - JOUR AU - Shirogane, T. AU - Fukada, T. AU - Muller, J. M. AU - Shima, D. T. AU - Hibi, M. AU - Hirano, T. PY - 1999 DA - 1999// TI - Synergistic roles for Pim-1 and c-Myc in STAT3-mediated cell cycle progression and antiapoptosis JO - Immunity VL - 11 UR - https://doi.org/10.1016/S1074-7613(00)80145-4 DO - 10.1016/S1074-7613(00)80145-4 ID - Shirogane1999 ER - TY - JOUR AU - Madeo, F. AU - Schlauer, J. AU - Frohlich, K. U. PY - 1997 DA - 1997// TI - Identification of the regions of porcine VCP preventing its function in Saccharomyces cerevisiae JO - Gene VL - 204 UR - https://doi.org/10.1016/S0378-1119(97)00535-0 DO - 10.1016/S0378-1119(97)00535-0 ID - Madeo1997 ER - TY - JOUR AU - Wu, D. AU - Chen, P. J. AU - Chen, S. AU - Hu, Y. AU - Nunez, G. AU - Ellis, R. E. PY - 1999 DA - 1999// TI - C. elegans MAC-1, an essential member of the AAA family of ATPases, can bind CED-4 and prevent cell death JO - Development VL - 126 ID - Wu1999 ER - TY - JOUR AU - Jung, C. H. AU - Ro, S. H. AU - Cao, J. AU - Otto, N. M. AU - Kim, D. H. PY - 2010 DA - 2010// TI - mTOR regulation of autophagy JO - FEBS Lett VL - 584 UR - https://doi.org/10.1016/j.febslet.2010.01.017 DO - 10.1016/j.febslet.2010.01.017 ID - Jung2010 ER - TY - JOUR AU - Rosner, M. AU - Siegel, N. AU - Valli, A. AU - Fuchs, C. AU - Hengstschlager, M. PY - 2010 DA - 2010// TI - mTOR phosphorylated at S2448 binds to raptor and rictor JO - Amino Acids VL - 38 UR - https://doi.org/10.1007/s00726-008-0230-7 DO - 10.1007/s00726-008-0230-7 ID - Rosner2010 ER - TY - JOUR AU - Watanabe, R. AU - Wei, L. AU - Huang, J. PY - 2011 DA - 2011// TI - mTOR signaling, function, novel inhibitors, and therapeutic targets JO - J Nucl Med VL - 52 ID - Watanabe2011 ER - TY - JOUR AU - Axe, E. L. AU - Walker, S. A. AU - Manifava, M. AU - Chandra, P. AU - Roderick, H. L. AU - Habermann, A. PY - 2008 DA - 2008// TI - Autophagosome formation from membrane compartments enriched in phosphatidylinositol 3-phosphate and dynamically connected to the endoplasmic reticulum JO - J Cell Biol VL - 182 UR - https://doi.org/10.1083/jcb.200803137 DO - 10.1083/jcb.200803137 ID - Axe2008 ER - TY - JOUR AU - Kegel, K. B. AU - Kim, M. AU - Sapp, E. AU - McIntyre, C. AU - Castano, J. G. AU - Aronin, N. PY - 2000 DA - 2000// TI - Huntingtin expression stimulates endosomal-lysosomal activity, endosome tubulation, and autophagy JO - J Neurosci VL - 20 ID - Kegel2000 ER - TY - JOUR AU - Yue, Z. AU - Horton, A. AU - Bravin, M. AU - DeJager, P. L. AU - Selimi, F. AU - Heintz, N. PY - 2002 DA - 2002// TI - A novel protein complex linking the delta 2 glutamate receptor and autophagy: implications for neurodegeneration in lurcher mice JO - Neuron VL - 35 UR - https://doi.org/10.1016/S0896-6273(02)00861-9 DO - 10.1016/S0896-6273(02)00861-9 ID - Yue2002 ER - TY - JOUR AU - Stefanis, L. AU - Larsen, K. E. AU - Rideout, H. J. AU - Sulzer, D. AU - Greene, L. A. PY - 2001 DA - 2001// TI - Expression of A53T mutant but not wild-type alpha-synuclein in PC12 cells induces alterations of the ubiquitin-dependent degradation system, loss of dopamine release, and autophagic cell death JO - J Neurosci VL - 21 ID - Stefanis2001 ER - TY - JOUR AU - Wolfe, D. M. AU - Lee, J. H. AU - Kumar, A. AU - Lee, S. AU - Orenstein, S. J. AU - Nixon, R. A. PY - 2013 DA - 2013// TI - Autophagy failure in Alzheimer’s disease and the role of defective lysosomal acidification JO - Eur J Neurosci VL - 37 UR - https://doi.org/10.1111/ejn.12169 DO - 10.1111/ejn.12169 ID - Wolfe2013 ER - TY - JOUR AU - Nixon, R. A. AU - Yang, D. S. PY - 2011 DA - 2011// TI - Autophagy failure in Alzheimer’s disease--locating the primary defect JO - Neurobiol Dis VL - 43 UR - https://doi.org/10.1016/j.nbd.2011.01.021 DO - 10.1016/j.nbd.2011.01.021 ID - Nixon2011 ER - TY - JOUR AU - Simoni, A. AU - Yu, L. M. PY - 2006 DA - 2006// TI - Preparation of organotypic hippocampal slice cultures: interface method JO - Nat Protoc VL - 1 UR - https://doi.org/10.1038/nprot.2006.228 DO - 10.1038/nprot.2006.228 ID - Simoni2006 ER -