Table 1 Potential RNA binding proteins for the extended α-SYN 3′UTR. RBPs highly expressed in the human brain with their binding motifs in the extended α-SYN 3′UTR
From: A novel extended form of alpha-synuclein 3′UTR in the human brain
Protein name | Full protein name | Target RNA motifs |
|---|---|---|
CELF4;BRUNOL4 | CUGBP Elav-like family member 4 | kgugukk |
CELF5;BRUNOL5 | CUGBP Elav-like family member 5 | ugugukk |
CELF6;BRUNOL6 | CUGBP Elav-like family member 6 | ugugdkg |
CNOT4 | CCR4-NOT transcription complex subunit 4 | gacaga |
FXR1 | FMR1 autosomal homolog 1 | aygacr |
HuR;ELAVL1 | ELAV like RNA binding protein 1 | uukruuu |
MATR3 | matrin 3 | maucuur |
MSI1 | musashi RNA binding protein 1 | uaguwrg |
NOVA1 | NOVA alternative splicing regulator 1 | ycay |
PUM2 | pumilio RNA binding family member 2 | uguanaua |
QKI | QKI, KH domain containing RNA binding | acuaay |
RBFOX1 | RNA binding protein, fox-1 homolog 1 | wgcaugm |
RBM28 | RNA binding motif protein 28 | gwguagd |