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Table 2 DEGs in four representative overlapped pathways and transcription in AMY

From: Region- and time-dependent gene regulation in the amygdala and anterior cingulate cortex of a PTSD-like mouse model

  2 weeks only 2 and 5 weeks 5 weeks only
Glutamatergic synapse ADCY3, ADCY6, GLS2, GLUL, GRIK3, GRIK4, GRM4, ITPR3, SHANK2 PLCB4, MAPK1 ADCY5, ADCY7, GNG4, GRM7, PRKACB, SLC17A6, SLC1A6, SLC38A1, ADCY1, ADCY8, DLGAP1, GNG5, GRIK5, HOMER2, MAPK3, PRKCG, SLC17A7
Ras signaling FGFR2, FGFR3, FGF16, MET, HGF, FOXO4, RALGDS, BRAP, KSR2, RASGRP3, PLCG1, VEGFA, RASA3, ABL1, KSR1 MAPK1, KITL, FGF22 PDGFB, MRAS, ELK1, FGF13, PRKCG, PTPN11, IGF1R, HTR7, RASSF1, MAPK3, RASGRP2, RIN1, PRKACB, PLA2G3, FGF1, GNG4, GNG5, CALM1
Axon guidance PLXNA1, LIMK1, PLXNB1, PLXNB3, MET, EPHB2, SEMA5B, UNC5B, SEMA3G, SEMA4D, ABL1 EPHB1, SEMA3F, MAPK1 NTNG2, CXCL12, SLIT3, PTK2, SEMA6D, UNC5A, EPHA8, NCK1, MAPK3, ROBO3, NFATC2, SRGAP1, SEMA4A
Endocytosis FGFR2, ARFGAP2, FGFR3, ERBB3, KIF5A, MET, ASAP2, ARPC5, LDLRAP1, RAB7, AMPH, RAB11FIP4, RAB11FIP5, ZFYVE27, ARRB1, FOLR1, GIT2, H2-T24, SMURF1, AGAP1, IQSEC1, MVB12B IQSEC3 PARD3, RET, USP8, PSD3, PIP5K1C, SMAD3, VPS37C, CYTH2, CAPZB, SRC, CHMP2B, IGF1R, CHMP1A, FAM21, HSPA2, NTRK1, ACAP2, SPG20, PARD6G, EPN1, IQSEC2
Regulation of actin cytoskeleton FGFR2, FGFR3, SSH1, LIMK1, PPP1R12B, WASF2, FGF16, GNA12, ITGB4, ARPC5, VAV2, PFN4, ITGA7, FGD3 FGF22, MAPK1, WASF1 PDGFB, ACTN4, MRAS, MYLK3, ITGA11, PIP5K1C, FGF13, ITGA4, SRC, INSRR, ITGA9, PTK2, CHRM3, ITGAV, ITGA8, ARAF, MAPK3, FGF1
Transcription GO:0006351 ARNT2, FOXO3, FOXO4, ZIC2, ZGPAT, ZFP932, OLIG3, PPP1R1B, CREB3L2, ZFP687, ZFP276, SATB1, MED12, ZFP629, ZHX3, RRP8, TRERF1, ZFP592, ASCC2, KDM2A, ARRB1, FLII, VGLL4, MYBBP1A, TSHZ2, LITAF, SETD1B, SOX4, TRRAP, SOX8, XAB2, CASZ1, NKX3–1, MTERF2, TCF25, HIP1, MAFG, DNMT3A, IKZF4, TAF3, BHLHE22, SMAD7, TAF8, CREBBP, FOXP2, SREBF2, SAFB2, HDAC4, NOTCH1, SMARCC2, DNMT1, HIVEP1, KAT6B, ADAR, FOXK1, HR, LBH, SUPT5, KDM5C, FOXJ2, SNAPC1, SNAPC4, TLE3, SPEN, MXD4, EYA4, HIPK2, ERN1, MYRF, CUX2, KMT2D, KMT2A, KMT2B, GON4L, MLF1, MINA, ZKSCAN17, SAFB, BCL11B, PRDM11, POU2F2, POU3F3, GATAD2B, POU3F2, BCL6, POU3F1, GTF3C1, CHD5, ZFP526, BRD2, L3MBTL1, PHF12, AFF1, SAP30BP, NKAPL, MEF2D, RPAP1, HNRNPUL1, THRAP3, KDM4B, MAMLD1, ZFP536 AKIRIN2, ATMIN, ARID3B, FOXQ1, JADE1, IL33, MXD1, MAPK1, ZFP740 MEF2C, THRA, PRR13, STAT5B, CBX4, MED25, ASCC1, CBX2, CBX6, RCBTB1, ZFP92, EPC1, SMARCD3, RARB, ZFP503, MAP 2 K6, MAGEL2, BEND6, ZHX2, SIX3, RXRG, SKOR1, GTF2IRD1, MAPK3, ZFP697, TFAP2C, CAMTA2, HMGB3, ELK1, MEIS1, TAL1, VDR, TRP53BP1, MEIS2, HEXIM2, DRAP1, LHX2, TCF4, SLC30A9, NAT14, RFX5, KLF13, TAF7, PTPN14, NR4A2, SMAD3, NR4A1, FEZF2, ZFHX4, PHF1, DLX5, EBF1, HOPX, HABP4, RFX3, ZFHX3, CREBRF, PAX6, ZEB1, ZFP641, KCNIP3, ARHGAP22, DYNLL1, YAP1, HSF4, BHLHE41, THRSP, INO80C, ZCCHC12, TBL1XR1, KHDRBS3, SSBP2, POLR1D, RUNX1T1, GTF2H5, GTF2B, NRIP2, MYT1L, CCND1, EYA1, CHMP1A, PIH1D1, HIPK2, CUX1, PEG3, THAP7, SEC14L2, ZBTB18, TSPYL2, ZFP664, GBX1, PER3, ZFP521, NFATC2, CHD6, ETV4, MAF, ZFP57, MNAT1, DBP, DACH2, HEYL, NEUROD2, NEUROD1, SP8, TBL1X, SP9, PBX3