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Table 1 SNPs with the strongest association with SAH from the GWAS results

From: Exome sequencing study revealed novel susceptibility loci in subarachnoid hemorrhage (SAH)

Chr

Pos

Ref

Alt

Cases MAF

Controls MAF

OR

P value

Function

Gene

10

72,300,743

G

C

0.087

0.274

3.97

6.94E-07

intronic

PALD1

2

1,437,410

C

T

0.245

0.484

2.90

1.16E-06

intronic

TPO

2

31,189,236

A

G

0.212

0.425

2.75

2.37E-06

intronic

GALNT14

2

31,189,304

C

T

0.212

0.425

2.75

2.37E-06

intronic

GALNT14

2

31,189,345

T

G

0.212

0.425

2.75

2.37E-06

intronic

GALNT14

2

31,189,401

G

A

0.212

0.425

2.75

2.37E-06

intronic

GALNT14

2

31,189,439

A

G

0.212

0.425

2.75

2.37E-06

intronic

GALNT14

10

72,306,967

T

C

0.174

0.366

2.74

3.33E-06

intronic

PALD1

10

72,306,978

A

C

0.174

0.366

2.74

3.33E-06

intronic

PALD1

2

1,437,163

C

A

0.168

0.376

2.98

6.23E-06

intronic

TPO

19

50,189,818

C

G

0.098

0.016

0.15

1.09E-05

intronic

PRMT1

20

3,846,843

T

C

0.348

0.172

0.39

1.34E-05

UTR3

MAVS

10

72,289,778

T

C

0.109

0.269

3.01

1.82E-05

exonic

PALD1

19

50,195,455

A

G

0.092

0.016

0.16

2.38E-05

intronic

CPT1C

4

1.85E+ 08

A

G

0.147

0.032

0.19

2.65E-05

intronic

TRAPPC11

7

28,449,965

C

T

0.033

0.140

4.82

2.73E-05

intronic

CREB5

2

1,442,417

T

C

0.163

0.355

2.82

2.80E-05

intronic

TPO

2

1,442,476

C

T

0.163

0.355

2.82

2.80E-05

intronic

TPO

5

58,334,645

G

A

0.054

0.199

4.32

3.43E-05

intronic

PDE4D

10

72,307,101

C

T

0.603

0.398

2.30

3.58E-05

exonic

PALD1

14

35,062,166

T

C

0.114

0.263

2.78

4.50E-05

intronic

SNX6

7

1.51E+ 08

G

C

0.315

0.516

2.32

4.78E-05

intronic

NUB1

18

14,796,080

A

G

0.234

0.382

2.02

5.39E-05

intronic

ANKRD30B

2

1,426,621

A

G

0.332

0.532

2.29

6.31E-05

intronic

TPO

9

1.02E+ 08

T

C

0.196

0.065

0.28

6.60E-05

intronic

GALNT12

15

23,049,369

A

G

0.337

0.177

0.42

8.36E-05

intronic

NIPA1

5

75,427,935

A

G

0.272

0.452

2.21

9.09E-05

exonic

SV2C

10

72,288,900

G

A

0.397

0.591

2.20

0.000103

intronic

PALD1

10

50,683,438

C

T

0.277

0.118

0.35

0.000104

intronic

ERCC6

6

70,970,299

T

C

0.223

0.091

0.35

0.000106

intronic

COL9A1