Table 2 Genotype distributions and chromosome locations of SNVs
From: Association of CaMK2A and MeCP2 signaling pathways with cognitive ability in adolescents
Gene | SNP ID | Allele/genotype | Subjects | Chromosome region | Genotype frequency |
|---|---|---|---|---|---|
GRIN1 | 9q34.3 | ||||
rs4880213 | CC/CT/TT | 124/368/340 | 0.15/0.44/0.41 | ||
rs11146020 | CC/CG/GG | 565/239/28 | 0.68/0.29/0.03 | ||
GRIN2B | 12p12 | ||||
rs3764028 | CC/CG/GG | 250/396/186 | 0.30/0.48/0.22 | ||
rs1806201 | AA/AG/GG | 223/438/171 | 0.27/0.53/0.20 | ||
rs1805247 | AA/AG/GG | 608/204/20 | 0.73/0.25/0.02 | ||
rs1805502 | AA/AG/GG | 608/203/20 | 0.73/0.24/0.03 | ||
rs7301328 | AA/AC/CC | 148/397/287 | 0.18/0.48/0.34 | ||
GRIN2C | 17q25 | ||||
rs3744215 | AA/AC/CC | 143/423/266 | 0.17/0.51/0.32 | ||
GRIN3A | 9q34.1 | ||||
rs10989591 | CC/CT/TT | 738/90/4 | 0.89/0.11/0.01 | ||
rs10989589 | CC/CT/TT | 527/265/40 | 0.63/0.32/0.05 | ||
rs3739722 | CC/CT/TT | 508/287/37 | 0.61/0.35/0.04 | ||
rs62000403 | TT/AT/AA | 708/115/9 | 0.85/0.14/0.01 | ||
GRIN3B | 19p13.3 | ||||
rs2240154 | CC/CT/TT | 254/405/173 | 0.31/0.49/0.21 | ||
rs35592366 | CC/AC/AA | 627/191/14 | 0.75/0.23/0.02 | ||
rs55646937 | GG/AG/AA | 562/231/39 | 0.58/0.28/0.05 | ||
rs12978900 | TT/CT/TT | 697/133/2 | 0.84/0.16/0.01 | ||
rs4807399 | CC/CT/TT | 707/119/6 | 0.86/0.14/0.01 | ||
rs2240157 | CC/CT/TT | 207/413/212 | 0.25/0.50/0.26 | ||
rs10666583 | MM/Mm/mm | 730/98/4 | 0.88/0.12/0.01 | ||
rs2240158 | CC/CT/TT | 597/214/21 | 0.72/0.26/0.03 | ||
rs2285906 | GG/AG/AA | 626/183/23 | 0.75/0.22/0.03 | ||
rs10417824 | TT/AT/AA | 362/355/115 | 0.23/0.22/0.08 | ||
rs10401454 | CC/CG/GG | 622/163/47 | 0.75/0.23/0.02 | ||
GRIA1 | 5q33.2 | ||||
rs548294 | CC/CT/TT | 374/372/86 | 0.45/0.45/0.10 | ||
GRID1 | 10q23.1-2 | ||||
rs3814614 | GG/AG/AA | 522/266/42 | 0.63/0.32/0.05 | ||
CaMK2A | 5q32 | ||||
rs2241694 | GG/AG/AA | 580/235/16 | 0.70/0.28/0.02 |