Chromosome number
|
Start
|
End
|
Gene annotation
|
BM vs No CNS
|
LM vs No CNS
|
---|
Methylation status
|
P value
|
T statistic
|
Methylation status
|
P value
|
T statistic
|
---|
4
|
90757454
|
90757576
|
SNCA |Promoter
|
Hyper
|
0.034
|
2.24
|
Hyper
|
0.035
|
2.34
|
5
|
16180211
|
16180460
|
MARCH11|Promoter
|
Hyper
|
0.043
|
2.13
|
Hyper
|
0.007
|
3.13
|
5
|
170736160
|
170736492
|
TLX3|Promoter
|
Hyper
|
0.016
|
2.52
|
Hyper
|
0.005
|
3.12
|
5
|
170736484
|
170736738
|
TLX3|Promoter
|
Hyper
|
0.026
|
2.34
|
Hyper
|
0.003
|
3.33
|
7
|
96632708
|
96632856
|
DLX6-AS1|Promoter
|
Hyper
|
0.022
|
2.39
|
Hyper
|
0.014
|
2.71
|
12
|
54611524
|
54611763
|
Intergenic
|
Hyper
|
0.018
|
2.58
|
Hyper
|
0.028
|
2.39
|
16
|
55090570
|
55090893
|
Intergenic
|
Hyper
|
0.042
|
2.17
|
Hyper
|
0.036
|
2.34
|
2
|
18011761
|
18011781
|
Intergenic
|
Hypo
|
0.028
|
− 2.27
|
Hypo
|
0.025
|
− 2.40
|
4
|
148402563
|
148402748
|
EDNRA|Promoter
|
Hypo
|
0.032
|
− 2.23
|
Hypo
|
0.020
|
− 2.42
|
5
|
87976039
|
87976329
|
LINC00461|Promoter
|
Hypo
|
0.042
|
− 2.10
|
Hypo
|
0.010
|
− 2.76
|
15
|
45421905
|
45422101
|
DUOXA1|Promoter
|
Hypo
|
0.007
|
− 2.91
|
Hypo
|
0.005
|
− 2.99
|
17
|
37856019
|
37856236
|
ERBB2|Promoter
|
Hypo
|
0.036
|
− 2.16
|
Hypo
|
0.000
|
− 3.87
|
18
|
44786740
|
44787022
|
Intergenic
|
Hypo
|
0.004
|
− 3.13
|
Hypo
|
0.014
|
− 2.58
|
19
|
10047644
|
10047809
|
OLFM2|Promoter
|
Hypo
|
0.004
|
− 3.03
|
Hypo
|
0.022
|
− 2.39
|
19
|
13616982
|
13617171
|
CACNA1A|Promoter
|
Hypo
|
0.029
|
− 2.25
|
Hypo
|
0.024
|
− 2.35
|
- no CNS no central nervous system-related metastasis, hypo hypomethylated status, hyper hypermethylated status